School Of Basic And Applied Sciences
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Item Synergistic effect of eco-friendly pistachio shell biomass on nano-MnO2 for crystal violet removal: kinetic and equilibrium studies(Institute for Ionics, 2022-05-07T00:00:00) Kumar, S.; Brar, R. Singh; Saha, S.; Dahiya, A.; Kalpana; Babu, J. NagendraPistachio shell powder-supported MnO2 nanostructure-based eco-friendly nanocomposite (nMPP) was prepared via one-pot redox precipitation method and was characterized by FTIR, XRD, SEM, TEM, BET, TGA/DTA, and XPS techniques. SEM and TEM analysis revealed the pseudo-spherical and nanorod morphologies of the synthesized nano-MnO2 and found agglomerated on the pistachio biomass. The nMPP contains nearly 41% Mn as MnO2 (w/w %) dispersed onto the pistachio shell biomass as confirmed from EDX, TGA, and AAS analysis. The nMPP exhibits multi-process crystal violet (CV) removal phenomenon under different pH of aqueous dye solution. Under acidic pH, nMPP caused oxidative degradation of CV by in situ formed.OH radicals; while under the neutral pH, CV undergoes monolayer adsorption onto the surface of nMPP as confirmed from Langmuir adsorption isotherm fit with maximum equilibrium adsorption value of 148.7�mg.g?1. The nMPP nanomaterial exhibits a synergistic effect between adsorption efficiencies of pistachio shell biomass and nano-MnO2 for the effective removal of toxic CV dye. The maximum saturation adsorption and rate constant (k 2) value obtained from the pseudo-second-order kinetic fit model were 119.13�mg.g?1 and 5.0 � 10�4�g.mg?1�min?1, respectively. Graphical abstract: [Figure not available: see fulltext.] � 2022, The Author(s) under exclusive licence to Iranian Society of Environmentalists (IRSEN) and Science and Research Branch, Islamic Azad University.Item Bacillus subtilis CP4, isolated from native soil in combination with arbuscular mycorrhizal fungi promotes biofortification, yield and metabolite production in wheat under field conditions(John Wiley and Sons Inc, 2020-12-03T00:00:00) Yadav, R.; Ror, P.; Rathore, P.; Kumar, S.; Ramakrishna, W.Aims: The aim of this study was to identify the best combination of plant growth promoting bacteria (PGPB) and arbuscular mycorrhizal fungi (AMF) for biofortification and enhancing yield in wheat as well as improve soil health under field conditions. Another aim was to get insights into metabolite dynamics in plants treated with PGPB and AMF. Methods and Results: Different combinations of PGPB and AMF that gave good results in greenhouse study were used in a field study. The combined application of Bacillus subtilis CP4 (native PGPB) and AMF gave the best results with a significant increase in biomass, macronutrient and micronutrient content in wheat grains and improvement in yield-related parameters relative to the untreated control. PGPB and AMF treatment increased antioxidant enzymes and compounds and decreased the level of an oxidation marker. Metabolite profiling performed using Gas Chromatography�Mass Spectrometry (GC-MS) showed significant upregulation of specific organic acids, amino acids, sugars and sugar alcohols in plants treated with CP4 and AMF. The altered pathways due to CP4 and AMF inoculation mainly belong to carbohydrate and amino acid metabolism. A positive correlation was observed between some organic acids, sugars and amino acids with wheat growth and yield parameters. The activities of soil enzymes increased significantly with the best results shown by native PGPB and AMF combination. Conclusions: A native bacterial isolate Bacillus subtilis CP4 in combination with AMF showed exceptional ability for biofortification and yield enhancement under field conditions. The upregulation of a number of metabolites showed correlation plant growth promotion and nutrients. Significance and Impact of the Study: The combined application of native B. subtilis CP4 and AMF could offer a more sustainable approach for the development of a biofertilizer to enhance wheat nutrient content and production and soil health thereby advancing agriculture. � 2020 The Society for Applied MicrobiologyItem Bacillus subtilis CP4, isolated from native soil in combination with arbuscular mycorrhizal fungi promotes biofortification, yield and metabolite production in wheat under field conditions(John Wiley and Sons Inc, 2020-12-03T00:00:00) Yadav, R.; Ror, P.; Rathore, P.; Kumar, S.; Ramakrishna, W.Aims: The aim of this study was to identify the best combination of plant growth promoting bacteria (PGPB) and arbuscular mycorrhizal fungi (AMF) for biofortification and enhancing yield in wheat as well as improve soil health under field conditions. Another aim was to get insights into metabolite dynamics in plants treated with PGPB and AMF. Methods and Results: Different combinations of PGPB and AMF that gave good results in greenhouse study were used in a field study. The combined application of Bacillus subtilis CP4 (native PGPB) and AMF gave the best results with a significant increase in biomass, macronutrient and micronutrient content in wheat grains and improvement in yield-related parameters relative to the untreated control. PGPB and AMF treatment increased antioxidant enzymes and compounds and decreased the level of an oxidation marker. Metabolite profiling performed using Gas Chromatography�Mass Spectrometry (GC-MS) showed significant upregulation of specific organic acids, amino acids, sugars and sugar alcohols in plants treated with CP4 and AMF. The altered pathways due to CP4 and AMF inoculation mainly belong to carbohydrate and amino acid metabolism. A positive correlation was observed between some organic acids, sugars and amino acids with wheat growth and yield parameters. The activities of soil enzymes increased significantly with the best results shown by native PGPB and AMF combination. Conclusions: A native bacterial isolate Bacillus subtilis CP4 in combination with AMF showed exceptional ability for biofortification and yield enhancement under field conditions. The upregulation of a number of metabolites showed correlation plant growth promotion and nutrients. Significance and Impact of the Study: The combined application of native B. subtilis CP4 and AMF could offer a more sustainable approach for the development of a biofertilizer to enhance wheat nutrient content and production and soil health thereby advancing agriculture. � 2020 The Society for Applied MicrobiologyItem Identification of potential natural inhibitors of SARS-CoV2 main protease by molecular docking and simulation studies(Taylor and Francis Ltd., 2020) Gupta, S; Singh, A.K; Kushwaha, P.P; Prajapati, K.S; Shuaib, M; Senapati, S; Kumar, S.Coronaviruses are contagious pathogens primarily responsible for respiratory and intestinal infections. Research efforts to develop antiviral agents against coronavirus demonstrated the main protease (Mpro) protein may represent effective drug target. X-ray crystallographic structure of the SARS-CoV2 Mpro protein demonstrated the significance of Glu166, Cys141, and His41 residues involved in protein dimerization and its catalytic function. We performed in silico screening of compounds from Curcuma longa L. (Zingiberaceae family) against Mpro protein inhibition. Employing a combination of molecular docking, scoring functions, and molecular dynamics simulations, 267 compounds were screened by docking on Mpro crystallographic structure. Docking score and interaction profile analysis exhibited strong binding on the Mpro catalytic domain with compounds C1 (1E,6E)-1,2,6,7-tetrahydroxy-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione) and C2 (4Z,6E)?1,5?dihydroxy?1,7?bis(4?hydroxyphenyl)hepta?4,6?dien?3?one as lead agents. Compound C1 and C2 showed minimum binding score (�9.08 and �8.07 kcal/mole) against Mpro protein in comparison to shikonin and lopinavir (? ?5.4 kcal/mole) a standard Mpro inhibitor. Furthermore, principal component analysis, free energy landscape and protein-ligand energy calculation studies revealed that these two compounds strongly bind to the catalytic core of the Mpro protein with higher efficacy than lopinavir, a standard antiretroviral of the protease inhibitor class. Taken together, this structure based optimization has provided lead on two natural Mpro inhibitors for further testing and development as therapeutics against human coronavirus. Communicated by Ramaswamy H. Sarma. � 2020, � 2020 Informa UK Limited, trading as Taylor & Francis Group.Item On new symmetry, series solution and conservation laws of nonlinear coupled Higgs field equation(Springer, 2020) Kumari, P; Gupta, R.K; Kumar, S.The work presents systematic investigations on invariant analysis and the analytic solution of the second order Higgs equation. On employing Lie classical approach, new symmetry and the corresponding reduction of the system are obtained. Explicit convergent infinite series solution of the reduced system is obtained. Local conservation laws of the system are derived by the multiplier approach. 2020, Società Italiana di Fisica and Springer-Verlag GmbH Germany, part of Springer Nature.Item Emerging role of ZBTB7A as an oncogenic driver and transcriptional repressor(Elsevier, 2020) Gupta, S; Singh, A.K; Prajapati, K.S; Kushwaha, P.P; Shuaib, M; Kumar, S.ZBTB7A is a member of the POK family of transcription factors that possesses a POZ-domain at the N-terminus and Krüppel-like zinc-finger at the c-terminus. ZBTB7A was initially isolated as a protein that binds to the inducer of the short transcript of HIV-1 virus TAT gene promoter. The protein forms a homodimer through protein-protein interaction via the N-terminus POZ-domains. ZBTB7A typically binds to the DNA elements through its zinc-finger domains and represses transcription both by modification of the chromatin organization and through the direct recruitment of transcription factors to gene regulatory regions. ZBTB7A is involved in several fundamental biological processes including cell proliferation, differentiation, and development. It also participates in hematopoiesis, adipogenesis, chondrogenesis, cellular metabolism and alternative splicing of BCLXL, DNA repair, development of oligodendrocytes, osteoclast and unfolded protein response. Aberrant ZBTB7A expression promotes oncogenic transformation and tumor progression, but also maintains a tumor suppressive role depending on the type and genetic context of cancer. In this comprehensive review we provide information about the structure, function, targets, and regulators of ZBTB7A and its role as an oncogenic driver and transcriptional repressor in various human diseases. - 2020 Elsevier B.V.Item Emerging Role of Migration and Invasion Enhancer 1 (MIEN1) in Cancer Progression and Metastasis(Frontiers Media S.A., 2019) Kushwaha, P.P; Gupta, S; Singh, A.K; Kumar, S.Tumor metastasis is a sequential event accounting for numerous cancer-related fatalities worldwide. The process of metastasis serially involves invasion, intravasation, extravasation, and tumor growth at the secondary site. Migration and invasion enhancer 1 (MIEN1) is a membrane associated protein overexpressed in various human cancers. Biological activity of MIEN1 is driven by geranylgeranyltransferase-I mediated prenylation at CAAX motif and methylation of the prenylated protein that anchors MIEN1 into the cellular membrane. Post-translationally modified MIEN1 interacts with Syk kinase and Annexin A2 protein; polymerizes G-actin and stabilizes F-actin filament; induces focal adhesion kinase phosphorylation and decrease cofilin phosphorylation implicated in both invasion and metastasis of different cancer types. In the present review, we discuss the structure, function, and involvement of MIEN1 in cancer progression. We also highlight the future prospects of MIEN1 as an emerging molecule and novel target in cancer cell invasion and metastasis.Item Terpenoids: Synthesis and biological activities(Nova Science Publisher Inc., 2018) Kushwaha, P.P.; Kumar, S.Terpenoid is the naturally occurring compound synthesized from isoprene units. Terpenoid plays a variety of functions in the growth and development of plants. Most of the terpenoid perform chemical communications and defense function in both biotic and abiotic environment. Terpenoid is classified into different groups such as monoterpene, diterpene, a sesquiterpene, triterpene, tetraterpene, and polyterpene. Terpenoids are reported for their excellent anti-platelet aggregation and anticancer activity. They regulate cellular signaling pathway, cell cycle phases and induce apoptosis. In this chapter, we mainly focused on the different class of the terpenoid, function and their biosynthesis in the plant system. ? 2018 Nova Science Publishers, Inc.Item Secondary metabolite and functional food components: Role in health and disease(Nova Science Publisher Inc., 2018) Kumar, S.Secondary Metabolites and Functional Food Components: Their Roles in Health and Disease consists of original chapters, provides updates to previous source material and acts as a unique source of information for all those interested in secondary metabolites and functional food components. The proposed publication focuses on the pharmaceutical and food industries, with an emphasis on their aspects pertaining to chemistry, nutrition sciences, biochemistry and biology. In the present book, the major secondary metabolites and the chemistry in conjunction with functional food components have been discussed. The book also deals with the role of secondary metabolites in human health and diseases. This book is specifically marketed towards graduate and master?s students. It deals with the knowledge and recent advancements in the field of secondary metabolites and functional food components as well as their importance in health and disease. Moreover, the book will also be very useful for the students preparing for various competitive examinations such as the CSIR, ICMR, DBT, and ICAR JRF/NET exams. ? 2018 by Nova Science Publishers, Inc. All rights reserved.Item Objective and subjective exercise(Nova Science Publishers, Inc., 2017) Sharma, A.K.; Kumar, S.[No abstract available]