Shared and unique common genetic determinants between pediatric and adult celiac disease

dc.contributor.authorSenapati, S.
dc.contributor.authorSood, A.
dc.contributor.authorMidha, V.
dc.contributor.authorSood, N.
dc.contributor.authorSharma, S.
dc.contributor.authorKumar, L.
dc.contributor.authorThelma, B.K.
dc.date.accessioned2018-07-14T01:19:10Z
dc.date.accessioned2024-08-14T07:41:26Z
dc.date.available2018-07-14T01:19:10Z
dc.date.available2024-08-14T07:41:26Z
dc.date.issued2016
dc.description.abstractBackground: Based on age of presentation, celiac disease (CD) is categorised as pediatric CD and adult CD. It however remains unclear if these are genetically and/or phenotypically distinct disorders or just different spectrum of the same disease. We therefore explored the common genetic components underlying pediatric and adult CD in a well characterized north Indian cohort. Methods: A retrospective analysis of children (n = 531) and adult (n = 871) patients with CD between January 2001 and December 2010 was done. The database included basic demographic characteristics, clinical presentations, associated diseases and complications, if any. The genotype dataset was acquired for children (n = 217) and adult CD patients (n = 340) and controls (n = 736) using Immunochip. Association analysis was performed using logistic regression model to identify susceptibility genetic variants. Results: The predominant form of CD was classical CD in both pediatric and adult CD groups. There was remarkable similarity between pediatric and adult CD except for quantitative differences between the two groups such as female preponderance, non-classical presentation, co-occurrence of other autoimmune diseases being more common amongst adult CD. Notably, same HLA-DQ2 and -DQ8 haplotypes were established as the major risk factors in both types of CD. In addition, a few suggestively associated (p < 5 ? 10-4) non-HLA markers were identified of which only ANK3 (rs4948256-A; rs10994257-T) was found to be shared and explain risk for ?45 % of CD patients with HLA allele. Discussion: Overall phenotypic similarity between pediatric and adult CD groups can be explained by contribution of same HLA risk alleles. Different non-HLA genes/loci with minor risk seem to play crucial role in disease onset and extra intestinal manifestation of CD. None of the non-HLA risk variants reached genome-wide significance, however most of them were shown to have functional implication to disease pathogenesis. Functional relevance of our findings needs to be investigated to address clinical heterogeneity of CD. Conclusions: This present study is the first comparative study based on common genetic markers to suggest that CD in pediatric age group and in adults are the spectrum of the same disease with novel and shared genetic risk determinants. Follow-up fine mapping studies with larger study cohorts are warranted for further genetic investigation. ? 2016 The Author(s).en_US
dc.identifier.citationSenapati, S., Sood, A., Midha, V., Sood, N., Sharma, S., Kumar, L., & Thelma, B. K. (2016). Shared and unique common genetic determinants between pediatric and adult celiac disease. BMC Medical Genomics, 9(1). doi: 10.1186/s12920-016-0211-8en_US
dc.identifier.doi10.1186/s12920-016-0211-8
dc.identifier.issn17558794
dc.identifier.urihttps://kr.cup.edu.in/handle/32116/1466
dc.identifier.urlhttps://bmcmedgenomics.biomedcentral.com/articles/10.1186/s12920-016-0211-8
dc.language.isoen_USen_US
dc.publisherBioMed Central Ltd.en_US
dc.subjectAnkyrinen_US
dc.subjectAnkyrin 3en_US
dc.subjectDnaen_US
dc.subjectHla Dq2 Antigenen_US
dc.subjectHla Dq8 Antigenen_US
dc.subjectUnclassified Drugen_US
dc.subjectAdulten_US
dc.subjectAnk3 Gene Autoimmune Diseaseen_US
dc.subjectCeliac Diseaseen_US
dc.subjectChilden_US
dc.subjectClinical Featureen_US
dc.subjectCohort Analysisen_US
dc.subjectComorbidityen_US
dc.subjectComparative Studyen_US
dc.subjectControlled Studyen_US
dc.subjectFemaleen_US
dc.subjectFollow Upen_US
dc.subjectGene Locusen_US
dc.subjectGene Mappingen_US
dc.subjectGenetic Associationen_US
dc.subjectGenetic Heterogeneityen_US
dc.subjectGenetic Markeren_US
dc.subjectGenetic Predispositionen_US
dc.subjectGenetic Risken_US
dc.subjectGenetic Variabilityen_US
dc.subjectGenome Analysisen_US
dc.subjectGenotype Phenotype Correlationen_US
dc.subjectHaplotypeen_US
dc.subjectHla Typingen_US
dc.subjectHumanen_US
dc.subjectIndianen_US
dc.subjectMajor Clinical Sen_US
dc.titleShared and unique common genetic determinants between pediatric and adult celiac diseaseen_US
dc.title.journalBMC Medical Genomics
dc.typeArticleen_US

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