School Of Basic And Applied Sciences
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Item Gaussian field-based 3D-QSAR and molecular simulation studies to design potent pyrimidine-sulfonamide hybrids as selective BRAFV600E inhibitors(Royal Society of Chemistry, 2022-10-21T00:00:00) Singh, Ankit Kumar; Novak, Jurica; Kumar, Adarsh; Singh, Harshwardhan; Thareja, Suresh; Pathak, Prateek; Grishina, Maria; Verma, Amita; Yadav, Jagat Pal; Khalilullah, Habibullah; Pathania, Vikas; Nandanwar, Hemraj; Jaremko, Mariusz; Emwas, Abdul-Hamid; Kumar, PradeepThe �RAS-RAF-MEK-ERK� pathway is an important signaling pathway in melanoma. BRAFV600E (70-90%) is the most common mutation in this pathway. BRAF inhibitors have four types of conformers: type I (?C-IN/DFG-IN), type II (?C-IN/DFG-OUT), type I1/2 (?C-OUT/DFG-IN), and type I/II (?C-OUT/DFG-OUT). First- and second-generation BRAF inhibitors show resistance to BRAFV600E and are ineffective against malignancies induced by dimer BRAF mutants causing �paradoxical� activation. In the present study, we performed molecular modeling of pyrimidine-sulfonamide hybrids inhibitors using 3D-QSAR, molecular docking, and molecular dynamics simulations. Previous reports reveal the importance of pyrimidine and sulfonamide moieties in the development of BRAFV600E inhibitors. Analysis of 3D-QSAR models provided novel pyrimidine sulfonamide hybrid BRAFV600E inhibitors. The designed compounds share similarities with several structural moieties present in first- and second-generation BRAF inhibitors. A total library of 88 designed compounds was generated and molecular docking studies were performed with them. Four molecules (T109, T183, T160, and T126) were identified as hits and selected for detailed studies. Molecular dynamics simulations were performed at 900 ns and binding was calculated. Based on molecular docking and simulation studies, it was found that the designed compounds have better interactions with the core active site [the nucleotide (ADP or ATP) binding site, DFG motif, and the phospho-acceptor site (activation segment) of BRAFV600E protein than previous inhibitors. Similar to the FDA-approved BRAFV600E inhibitors the developed compounds have [?C-OUT/DFG-IN] conformation. Compounds T126, T160 and T183 interacted with DIF (Leu505), making them potentially useful against BRAFV600E resistance and malignancies induced by dimer BRAF mutants. The synthesis and biological evaluation of the designed molecules is in progress, which may lead to some potent BRAFV600E selective inhibitors. � 2022 The Royal Society of Chemistry.Item Coupling Nonstoichiometric Zn0.76Co0.24S with NiCo2S4Composite Nanoflowers for Efficient Synergistic Electrocatalytic Oxygen and Hydrogen Evolution Reactions(American Chemical Society, 2022-12-15T00:00:00) Biswas, Rathindranath; Thakur, Pooja; Ahmed, Imtiaz; Rom, Tanmay; Ali, Mir Sahidul; Patil, Ranjit A.; Kumar, Bhupender; Som, Shubham; Chopra, Deepak; Paul, Avijit Kumar; Ma, Yuan-Ron; Haldar, Krishna KantaTransition-metal sulfide-based composite nanomaterials have garnered extensive interest not only for their unique morphological architectures but also for exploring as a noble-metal-free cost-effective, durable, and highly stable catalyst for electrochemical water splitting. In this work, we synthesized in situ nonstoichiometric Zn0.76Co0.24S with NiCo2S4binary composite flowers (Zn0.76Co0.24S/NiCo2S4) in one step by thermal decomposition of Zn2[PDTC]4and Ni[PDTC]2complexes by a solvothermal process in a nonaqueous medium from their molecular precursor, and their potential application in electrochemical oxygen evolution reaction (OER) and hydrogen evolution reaction (HER) was investigated. Field-emission scanning electron microscopy and transmission electron microscopy analyses revealed the flower-shaped morphology of as-synthesized Zn0.76Co0.24S/NiCo2S4. Again, the structural and chemical compositions were confirmed through powder X-ray diffraction and X-ray photoelectron spectroscopy studies, respectively. The as-obtained 3D flower-type Zn0.76Co0.24S/NiCo2S4nanostructure was further subject to electrochemical OER and HER in alkaline and acidic media, respectively. Zn0.76Co0.24S/NiCo2S4showed low overpotential values of 248 mV (Tafel slope, 85 mV dec-1) and 141 mV (Tafel slope, 79 mV dec-1) for OER and HER activities, respectively, due to the synergistic effects of Zn0.76Co0.24S and NiCo2S4. Several long-term stability tests also affirmed that the Zn0.76Co0.24S/NiCo2S4composite nanostructure is a highly stable and efficient electrocatalyst toward OER and HER activities as compared to the recently reported superior bifunctional electrocatalysts as well as state-of-the-art materials. � 2023 American Chemical Society. All rights reserved.Item A cascade A3 coupling strategy towards the regioselective synthesis of ?-carboline N-fused pyrrole derivatives with pyridine tethers(Royal Society of Chemistry, 2022-12-01T00:00:00) Vaishali, None; Malakar, Chandi C.; Singh, VirenderA potential three component reaction strategy has been devised to generate nature inspired ?-carboline N-fused pyrroles containing pyridine tethers. These scaffolds were afforded in high yields via a one-pot cascade regioselective reaction of diverse Kumujian C, 2-aminopyridines and alkyne derivatives under Cu(ii)-catalysis. A library of 32 novel indolizino[8,7-b]indole derivatives with pyridine tethers has been developed. The current protocol offers excellent regioselectivity, high atom-economy and significant structural diversity. � 2023 The Royal Society of Chemistry.Item Direct Michael addition/decarboxylation reaction catalyzed by a composite of copper ferrite nanoparticles immobilized on microcrystalline cellulose: an eco-friendly approach for constructing 3,4-dihydrocoumarin frameworks(Royal Society of Chemistry, 2022-10-27T00:00:00) Kumar, Bhupender; Borah, Biplob; Babu, J. Nagendra; Chowhan, L. RajuA composite of copper ferrite oxide nanoparticles immobilized on microcrystalline cellulose (CuFe2O4@MCC) was synthesized. The synthesized composite was characterized by FESEM with EDS-Mapping, TEM, P-XRD, TEM, and BET analysis and investigated for its catalytic activity toward Tandem Michael addition and decarboxylation of coumarin-3-carboxylic acid with cyclic 1,3-diketones to obtain novel 3,4-dihydrocoumarin derivatives. This protocol was established with wide substrate scope and significant yield. The significant characteristics of this methodology are mild reaction conditions, easy setup procedure, non-toxic, and cost-effectiveness. A gram-scale synthesis with low catalyst loading was also demonstrated. � 2022 The Royal Society of Chemistry.Item Facile synthesis of alkyl- and arylboronate esters enabled by a carbon nanotube supported copper catalyst(Royal Society of Chemistry, 2022-11-15T00:00:00) Saini, Suresh; Gavali, Deepak S.; Bhawar, Ramesh; Thapa, Ranjit; Dhayal, Rajendra S.; Bose, Shubhankar KumarAn efficient synthesis of alkylboronate esters via alkyl halide borylation catalysed by copper nanoparticles stabilised on nitrogen-doped carbon nanotubes (N-CNT) is reported. This nanocatalyst provides practical access to alkylboronate esters at room temperature in 1 h, with good functional group tolerance. The procedure is also applicable to the borylation of benzyl chlorides and bromides. Radical clock experiments suggest that the reaction involves a radical pathway. The catalyst can be recycled up to ten runs without appreciable loss in the activity. In addition, we demonstrated the use of this supported copper catalyst for the anti-Markovnikov-selective hydroboration of vinylarenes and borylation of aryl halides with B2pin2, providing alkyl- and arylboronate esters, respectively, in good to excellent yields. � 2023 The Royal Society of Chemistry.Item Synthesis of in situ immobilized iron oxide nanoparticles (Fe3O4) on microcrystalline cellulose: Ecofriendly and recyclable catalyst for Michael addition(John Wiley and Sons Ltd, 2021-09-21T00:00:00) Kumar, Bhupender; Reddy, Marri Sameer; Dwivedi, Kartikey Dhar; Dahiya, Amarjeet; Babu, J. Nagendra; Chowhan, L. RajuMicrocrystalline cellulose-immobilized Fe3O4 magnetic nanoparticles (Fe3O4@MCC) with iron loading 5%�20% are synthesized and characterized by scanning electron microscopy (SEM), X-ray diffraction (XRD), and thermogravimetric analysis (TGA). The synthesized nanocomposites were studied for their catalytic activity towards Michael addition reaction by employing 1,3-cyclohexadione/dimedone and styrylisoxazole in an aqueous ethanolic medium. The catalyst with 15% iron loading showed the highest efficiency with an excellent yield. Michael addition reaction is one of the most important reaction for the creation of a carbon�carbon bond and widely used in organic synthesis under mild condition. The prepared catalyst performed well in Michael addition reaction and afforded the product in excellent yield. The products were isolated by simple filtration without use of any chromatographic techniques. The scale-up experiment on 10-mmol scale proved the sustainability of the methodology. The catalyst was recycled, and the recovered catalyst data showed no considerable depreciation in catalytic activity even after 5 consecutive cycles. The advantages of this green and safe procedure include a simple reaction set-up, very mild reaction conditions, high yields, moderate reaction time, recyclable catalyst, and easy separation of the products without use of any tedious separation techniques. � 2021 John Wiley & Sons, Ltd.Item Titania sensitized with SPADNS dye for dye sensitized solar cell(Springer New York LLC, 2016) Didwal, P.N.; Pawar, K.S.; Chikate, P.R.; Abhyankar, A.C.; Pathan, H.M.; Devan, R.S.Synthesis of anatase TiO2 nanoparticle with diameter about 25?nm is carried out by using chemical method and powder of TiO2 nanoparticle is pasted on fluorine doped tin oxide (FTO) coated glass by doctor blade. New organic SPADNS dye (C16H9N2Na3O11S3) is used first time to make the dye-sensitized solar cells (DSSC). Cell were constructed by using SPADNS dye loaded wide band gap anatase TiO2 nanoparticle on FTO coated glass as photo-anode, polyiodide as electrolyte, and platinum coated FTO as counter electrode. SPADNS dye was made from organic reagent which is low cost and easy available in market. Better adsorption of SPADNS dye on anatase TiO2 film is due to porous nature of TiO2. This better adsorption gives more transportation of electron from dye to TiO2 which increase the efficiency of solar cell. Although SPADNS dye is the first experiment with TiO2 nanoparticle for DSSC, it gives photocurrent (short-circuit current density) 1.04?mA/cm2, open-circuit voltage 0.59?V, with 0.9?% efficiency under 10?mW/m2 LED. ? 2016, Springer Science+Business Media New York.Item Nickel oxide decorated zinc oxide composite nanorods: Excellent catalyst for photoreduction of hexavalent chromium(Academic Press Inc., 2018) Singh, Simranjeet; Ahmed,Imtiaz; Haldar, Krishna KantaIn light of the growing interest and ability to search for new materials, we have synthesized Nickel oxide (NiO) nanoparticles decorated Zinc (ZnO) nanorods composite (NiO/ZnO) nanostructure. The NiO/ZnO heterostructure formation was confirmed by X-ray powder diffraction and high-resolution transmission electron microscopy (HRTEM). The fabricated environmental friendly NiO/ZnO composite nanostructure shows a well-defined photoreduction characteristic of hexavalent Chromium (Cr) (VI) to tri-valent Chromium (Cr) (III) under UV-light. Such an enhanced photoreduction property is attributed due to the decreased electron-hole recombination process which was proved by photoluminescence (PL) spectroscopy, photocurrent study, and electrochemical impedance spectroscopy. Furthermore, the photocatalytic activity rate of the NiO decorated ZnO nanorods was much higher than that of bare ZnO nanorods for the reduction of chromium (VI) and the rate is found to be 0.306 min?1. These results have demonstrates that suitable surface engineering may open up new opportunities in the development of high-performance photocatalyst. ? 2018 Elsevier Inc.Item Shell thickness matters! Energy transfer and rectification study of Au/ZnO core/shell nanoparticles(Academic Press Inc., 2016) Haldar, Krishna Kanta; Sen, TapasiIn the present study we report the influence of shell thickness on fluorescence resonance energy transfer between Au/ZnO core-shell nanoparticles and Rhodamine 6G dye by steady-state and time-resolved spectroscopy and rectification behaviours. Au/ZnO core-shell nanoparticles with different shell thickness were synthesized in aqueous solution by chemically depositing zinc oxide on gold nanoparticles surface. A pronounced effect on the photoluminescence (PL) intensity and shortening of the decay time of the dye in presence of Au/ZnO core-shell nanoparticles is observed. The calculated energy transfer efficiencies from dye to Au/ZnO are 62.5%, 79.2%, 53.6% and 46.7% for 1.5 nm, 3 nm, 5 nm and 8 nm thickness of shell, respectively. Using FRET process, the calculated distances (r) are 117.8, 113.2 ? 129.9 ? and 136.7 ? for 1.5 nm, 3 nm, 5 nm and 8 nm thick Au/ZnO core-shell nanoparticles, respectively. The distances (d) between the donor and acceptor are 71.0, 57.8, 76.2 and 81.6 ? for 1.5 nm, 3 nm, 5 nm and 8 nm thick core-shell Au/ZnO nanoparticles, respectively, using the efficiency of surface energy transfer (SET). The current-voltage (I-V) curve of hybrid Au/ZnO clearly exhibits a rectifying nature and represents the n-type Schottky diode characteristics with a typical turn-on voltage of between 0.6 and 1.3 V. It was found that the rectifying ratio increases from 20 to 90 with decreasing the thickness of the shell from 5 nm to 3 nm and with shell thickness of 8 nm, electrical transport through the core-shell is similar to what is observed with pure ZnO samples nanoparticles. The results indicated that the Au/ZnO core-shell nanoparticles with an average shell thickness of 3 nm exhibited the maximum energy transfer efficiencies (79.2%) and rectification (rectifying ratio 90). ? 2016